U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



C.can genome v1.0

Organism name:
Castor canadensis (American beaver)
Isolate:
Ward
Sex:
male
BioSample:
SAMN06187566
BioProject:
PRJNA359140
Submitter:
Hospital for Sick Children
Date:
2017/02/04
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001984765.1 (latest)
RefSeq assembly accession:
GCF_001984765.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MTKA01
Assembly method:
ABySS v. 1.9.0; Canu v. 1.2; Platanus v. 1.2.4
Expected final version:
no
Genome coverage:
110.0x
Sequencing technology:
Illumina HiSeq; PacBio

IDs: 994011 [UID] 4088328 [GenBank] 4101318 [RefSeq]

See Genome Information for Castor canadensis

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,518,306,565
Total ungapped length2,517,974,655
Gaps between scaffolds0
Number of scaffolds21,157
Scaffold N50317,708
Scaffold L502,073
Number of contigs24,477
Contig N50273,954
Contig L502,431
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)21,157

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,518,306,56521,1572,517,974,655317,7083,3200