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ASM198359v1

Organism name:
Streptomyces sp. IB2014 011-1 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: IB2014 011-1
BioSample:
SAMN04932664
BioProject:
PRJNA320350
Submitter:
Helmholtz Centre for Infection Research
Date:
2017/02/02
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001983595.1 (latest)
RefSeq assembly accession:
GCF_001983595.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LZQS01
Assembly method:
SPAdes v. 3.7
Expected final version:
no
Genome coverage:
706x
Sequencing technology:
Illumina HiSeq

IDs: 969181 [UID] 4026398 [GenBank] 4087928 [RefSeq]

See Genome Information for Streptomyces sp. IB2014 011-1

History (Show revision history)

Comment

Global statistics

Total sequence length8,195,763
Total ungapped length8,195,414
Gaps between scaffolds0
Number of scaffolds31
Scaffold N50484,465
Scaffold L505
Number of contigs33
Contig N50484,465
Contig L505
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)31

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,195,763318,195,414484,46520

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. IB2014 011-1Streptomyces sp. IB2014 011-1

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000718135.1Streptomyces cyaneofuscatustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.5089.9793.35

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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