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Aet_MR_1.0

Organism name:
Aegilops tauschii subsp. tauschii (monocots)
Infraspecific name:
Cultivar: AL8/78
BioSample:
SAMN05426520
BioProject:
PRJNA329335
Submitter:
Johns Hopkins University
Date:
2017/01/19
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001957025.1 (latest)
RefSeq assembly accession:
GCF_001957025.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
MCGU01
Assembly method:
MaSuRCA v. 3.2.1; Celera Assembler v. 8.3rc2
Expected final version:
no
Genome coverage:
201.0x
Sequencing technology:
PacBio; Illumina HiSeq; Illumina MiSeq

IDs: 954791 [UID] 3991878 [GenBank] 4112828 [RefSeq]

See Genome Information for Aegilops tauschii

There are 4 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length4,327,321,625
Total ungapped length4,327,321,625
Number of contigs68,538
Contig N50468,757
Contig L502,228
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)68,538

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,327,207,51368,5374,327,207,513468,75700
MoleculeTotal
Length
Chloroplast Pltd114,112
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