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ASM174628v1

Organism name:
Streptomyces sp. EN16 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: EN16
BioSample:
SAMN05567309
BioProject:
PRJNA338712
Submitter:
i3S, University of Porto
Date:
2016/09/25
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001746285.1 (latest)
RefSeq assembly accession:
GCF_001746285.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MJAF01
Assembly method:
A5-miseq v. Jan-2016
Expected final version:
yes
Genome coverage:
12.0x
Sequencing technology:
Illumina MiSeq

IDs: 802061 [UID] 3469698 [GenBank] 3471158 [RefSeq]

See Genome Information for Streptomyces sp. EN16

History (Show revision history)

Comment

Global statistics

Total sequence length8,570,873
Total ungapped length8,570,751
Gaps between scaffolds0
Number of scaffolds236
Scaffold N5067,345
Scaffold L5038
Number of contigs238
Contig N5066,002
Contig L5039
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)236

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,570,8732368,570,75167,34520

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. EN16Streptomyces sp. EN16

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650675.1Streptomyces anulatustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.1786.1283.35

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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