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ASM170463v1

Organism name:
Streptomyces sparsogenes (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: ATCC 25498
BioSample:
SAMN05366068
BioProject:
PRJNA328181
Submitter:
Tianjin University of Commerce
Date:
2016/08/14
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001704635.1 (latest)
RefSeq assembly accession:
GCF_001704635.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MAXF01
Assembly method:
SOAPdenovo v. 2.04
Expected final version:
no
Genome coverage:
86x
Sequencing technology:
Illumina

IDs: 781261 [UID] 3383498 [GenBank] 3385008 [RefSeq]

See Genome Information for Streptomyces sparsogenes

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length8,907,947
Total ungapped length8,907,947
Number of contigs276
Contig N5072,375
Contig L5038
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)276

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,907,9472768,907,94772,37500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sparsogenesStreptomyces sparsogenes

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001969965.1Streptomyces sparsogenes DSM 40356type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001969965.1Streptomyces sparsogenestype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9596.4488.57
Best-match type99.9596.4488.57

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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