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Ascru1

Organism name:
Ascoidea rubescens DSM 1968 (budding yeasts)
Infraspecific name:
Strain: DSM 1968
BioSample:
SAMN02746076
BioProject:
PRJNA207865
Submitter:
DOE Joint Genome Institute
Date:
2016/09/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001661345.1 (latest)
RefSeq assembly accession:
GCF_001661345.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LYBR01
Assembly method:
Allpaths-LG v. R38445
Genome coverage:
140x
Sequencing technology:
Illumina

IDs: 796341 [UID] 3452618 [GenBank] 4122358 [RefSeq]

See Genome Information for Ascoidea rubescens

There are 2 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://genome.jgi.doe.gov/Ascru1
JGI Project ID: 403147
The DNA was provided by Benjamin Stielow (bst08@dsmz.de)
The strain is available from ARS Culture Collection, National Center for Agricultural Utililzation Research, Peoria, IL USA
Contacts: Thomas W. Jeffries (twjeffri@wisc.edu)
Assembly and annotation done by JGI.
The JGI ... and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)  more

Global statistics

Total sequence length17,503,998
Total ungapped length17,458,255
Gaps between scaffolds0
Number of scaffolds63
Scaffold N501,035,938
Scaffold L506
Number of contigs326
Contig N50171,347
Contig L5033
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)326

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced17,503,9986317,458,2551,035,9382630