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Source database (GenBank or RefSeq) File type

ASM151421v1

Organism name:: Streptomyces bungoensis (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: DSM 41781
BioSample:: SAMN04193354
BioProject:: PRJNA299233
Submitter:: Bielefeld University
Date:: 2016/01/13
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_001514215.1 (latest)
RefSeq assembly accession:: GCF_001514215.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: LMWX01
Assembly method:: Newbler v. 2.8
Expected final version:: yes
Genome coverage:: 60.6x
Sequencing technology:: Illumina MiSeq

IDs: 618661 [UID] 2788558 [GenBank] 3136068 [RefSeq]

See Genome Information for Streptomyces bungoensis

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001514215.1	=	GCF_001514215.1	ASM151421v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI
Annotation Date::11/03/2015 16:32:00
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::3.0
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes::7,332
CDS::6,972
Pseudo Genes::287
rRNAs::1, 1, 2 (5S, 16S, 23S)
complete rRNAs::1 (5S)
partial rRNAs::1, 2 (16S, 23S)
tRNAs::68
ncRNA::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	8,408,982
Total ungapped length	8,368,106
Gaps between scaffolds	0
Number of scaffolds	73
Scaffold N50	318,751
Scaffold L50	8
Number of contigs	137
Contig N50	156,764
Contig L50	18
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	137

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	88.77	58.82	50.27

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ASM151421v1

See Genome Information for Streptomyces bungoensis

Pathogen Detection Resources

History (Show revision history)

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Genome-Annotation-Data

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