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marMar2.1

Organism name:
Marmota marmota marmota (Alpine marmot)
Sex:
male
BioSample:
SAMEA3214822
BioProject:
PRJEB8272
Submitter:
MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH
Date:
2015/11/20
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001458135.1 (replaced)
RefSeq assembly accession:
GCF_001458135.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CZRN01
Genome coverage:
30x

IDs: 590591 [UID] 2704858 [GenBank] 2794298 [RefSeq]

See Genome Information for Marmota marmota

History (Show revision history)

Comment

Global statistics

Total sequence length2,510,587,379
Total ungapped length2,411,726,595
Gaps between scaffolds0
Number of scaffolds14,543
Scaffold N5031,340,621
Scaffold L5025
Number of contigs77,915
Contig N5066,492
Contig L5010,673
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)14,543

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,510,587,37914,5432,411,726,59531,340,62163,3720
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