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aciJub1

Organism name:
Acinonyx jubatus (cheetah)
Isolate:
AJU 981 Chewbacca
Sex:
male
BioSample:
SAMN04127588
BioProject:
PRJNA297632
Submitter:
Saint Petersburg State University
Date:
2015/11/13
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_001443585.1 (latest)
RefSeq assembly accession:
GCF_001443585.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for GenBank version
WGS Project:
LLWD01
Assembly method:
SOAPdenovo v. September-2012
Expected final version:
yes
Genome coverage:
75.0x
Sequencing technology:
Illumina HiSeq

IDs: 583261 [UID] 2684378 [GenBank] 2721588 [RefSeq]

See Genome Information for Acinonyx jubatus

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,372,536,860
Total ungapped length2,330,606,652
Gaps between scaffolds0
Number of scaffolds14,382
Scaffold N503,122,036
Scaffold L50232
Number of contigs170,170
Contig N5035,120
Contig L5019,059
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)14,382

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,372,536,86014,3822,330,606,6523,122,036155,7880
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