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PtgICMP4091

Organism name:
Pseudomonas syringae pv. tagetis (g-proteobacteria)
Infraspecific name:
Strain: ICMP 4091
BioSample:
SAMN03976254
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from pathotype material
GenBank assembly accession:
GCA_001401315.1 (latest)
RefSeq assembly accession:
GCF_001401315.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRM01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
55.37324717x
Sequencing technology:
Illumina MiSeq

IDs: 553561 [UID] 2499288 [GenBank] 2500288 [RefSeq]

See Genome Information for Pseudomonas syringae group genomosp. 7

There are 7 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length6,042,399
Total ungapped length6,042,302
Gaps between scaffolds0
Number of scaffolds208
Scaffold N5072,809
Scaffold L5021
Number of contigs210
Contig N5072,809
Contig L5021
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)208

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,042,3992086,042,30272,80920
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