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PvrICMP2848

Organism name:
Pseudomonas viridiflava (g-proteobacteria)
Infraspecific name:
Strain: ICMP2848
BioSample:
SAMN03976266
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001401215.1 (latest)
RefSeq assembly accession:
GCF_001401215.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRS01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
66.78011283x
Sequencing technology:
Illumina MiSeq

IDs: 553511 [UID] 2499188 [GenBank] 2557258 [RefSeq]

See Genome Information for Pseudomonas viridiflava

There are 1540 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length5,902,031
Total ungapped length5,901,156
Gaps between scaffolds0
Number of scaffolds254
Scaffold N5045,266
Scaffold L5038
Number of contigs286
Contig N5040,755
Contig L5041
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)254

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,902,0312545,901,15645,266320
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