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PtrICMP9151

Organism name:
Pseudomonas tremae (g-proteobacteria)
Infraspecific name:
Strain: ICMP9151
BioSample:
SAMN03976253
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001401155.1 (latest)
RefSeq assembly accession:
GCF_001401155.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRO01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
76.53149417x
Sequencing technology:
Illumina MiSeq

IDs: 553481 [UID] 2499138 [GenBank] 2500188 [RefSeq]

See Genome Information for Pseudomonas tremae

There are 3 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length5,929,145
Total ungapped length5,928,959
Gaps between scaffolds0
Number of scaffolds510
Scaffold N50140,769
Scaffold L5014
Number of contigs520
Contig N50132,018
Contig L5015
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)510

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,929,1455105,928,959140,769100
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