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PtoICMP2844

Organism name:
Pseudomonas syringae pv. tomato (g-proteobacteria)
Infraspecific name:
Strain: ICMP 2844
BioSample:
SAMN03976246
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from pathotype material
GenBank assembly accession:
GCA_001401135.1 (latest)
RefSeq assembly accession:
GCF_001401135.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRN01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
62.330138x
Sequencing technology:
Illumina MiSeq

IDs: 553471 [UID] 2499108 [GenBank] 2676668 [RefSeq]

See Genome Information for Pseudomonas syringae group genomosp. 3

There are 74 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length6,261,430
Total ungapped length6,261,099
Gaps between scaffolds0
Number of scaffolds344
Scaffold N5045,004
Scaffold L5047
Number of contigs355
Contig N5043,854
Contig L5048
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)344

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,261,4303446,261,09945,004110
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