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PsyICMP3023

Organism name:
Pseudomonas syringae pv. syringae (g-proteobacteria)
Infraspecific name:
Strain: ICMP3023
BioSample:
SAMN03976255
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001401075.1 (latest)
RefSeq assembly accession:
GCF_001401075.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRK01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
72.611783x
Sequencing technology:
Illumina MiSeq

IDs: 553441 [UID] 2499058 [GenBank] 2633018 [RefSeq]

See Genome Information for Pseudomonas syringae

There are 431 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length6,073,080
Total ungapped length6,072,963
Gaps between scaffolds0
Number of scaffolds179
Scaffold N5076,745
Scaffold L5026
Number of contigs182
Contig N5074,814
Contig L5027
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)179

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,073,0801796,072,96376,74530
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