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PspICMP16929

Organism name:
Pseudomonas syringae pv. spinaceae (g-proteobacteria)
Infraspecific name:
Strain: ICMP16929
BioSample:
SAMN03976304
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001401065.1 (latest)
RefSeq assembly accession:
GCF_001401065.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRI01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
16.85273367x
Sequencing technology:
Illumina MiSeq

IDs: 553461 [UID] 2499088 [GenBank] 2632798 [RefSeq]

See Genome Information for Pseudomonas syringae

There are 431 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length6,038,703
Total ungapped length6,038,076
Gaps between scaffolds0
Number of scaffolds1,657
Scaffold N506,205
Scaffold L50295
Number of contigs1,676
Contig N506,193
Contig L50298
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,657

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,038,7031,6576,038,0766,205190
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