Format

Download Assembly

Send to:

Choose Destination

PsoICMP16925

Organism name:
Pseudomonas syringae pv. solidagae (g-proteobacteria)
Infraspecific name:
Strain: ICMP16925
BioSample:
SAMN03976256
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001401055.1 (latest)
RefSeq assembly accession:
GCF_001401055.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRH01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
32.42775983x
Sequencing technology:
Illumina MiSeq

IDs: 553431 [UID] 2499028 [GenBank] 2633658 [RefSeq]

See Genome Information for Pseudomonas syringae

There are 431 assemblies for this organism

See more

History (Show revision history)

Global statistics

Total sequence length5,980,445
Total ungapped length5,970,875
Gaps between scaffolds0
Number of scaffolds382
Scaffold N5037,373
Scaffold L5052
Number of contigs701
Contig N5017,598
Contig L50105
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)382

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,980,4453825,970,87537,3733190
Support Center