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PriICMP3882

Organism name:
Pseudomonas syringae pv. ribicola (g-proteobacteria)
Infraspecific name:
Strain: ICMP3882
BioSample:
SAMN03976257
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from pathotype material
GenBank assembly accession:
GCA_001400955.1 (latest)
RefSeq assembly accession:
GCF_001400955.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRF01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
80.19539017x
Sequencing technology:
Illumina MiSeq

IDs: 553381 [UID] 2498888 [GenBank] 2632538 [RefSeq]

See Genome Information for Pseudomonas syringae group genomosp. 3

There are 74 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length5,892,840
Total ungapped length5,891,893
Gaps between scaffolds0
Number of scaffolds219
Scaffold N5052,114
Scaffold L5032
Number of contigs251
Contig N5047,330
Contig L5038
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)219

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,892,8402195,891,89352,114320
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