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PpoICMP8961

Organism name:
Pseudomonas coronafaciens pv. porri (g-proteobacteria)
Infraspecific name:
Strain: ICMP8961
BioSample:
SAMN03976299
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001400915.1 (latest)
RefSeq assembly accession:
GCF_001400915.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJRA01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
33.98634917x
Sequencing technology:
Illumina MiSeq

IDs: 553361 [UID] 2498848 [GenBank] 2555718 [RefSeq]

See Genome Information for Pseudomonas coronafaciens

There are 76 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length5,827,909
Total ungapped length5,827,861
Gaps between scaffolds0
Number of scaffolds320
Scaffold N5063,648
Scaffold L5030
Number of contigs323
Contig N5063,648
Contig L5030
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)320

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,827,9093205,827,86163,64830
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