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PfiICMP7848

Organism name:
Pseudomonas ficuserectae (g-proteobacteria)
Infraspecific name:
Strain: ICMP7848
BioSample:
SAMN03976279
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001400815.1 (latest)
RefSeq assembly accession:
GCF_001400815.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJQJ01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
19.02180917x
Sequencing technology:
Illumina MiSeq

IDs: 553311 [UID] 2498738 [GenBank] 2500168 [RefSeq]

See Genome Information for Pseudomonas ficuserectae

There are 3 assemblies for this organism

See more

History (Show revision history)

Global statistics

Total sequence length5,655,086
Total ungapped length5,642,472
Gaps between scaffolds0
Number of scaffolds624
Scaffold N5018,060
Scaffold L5099
Number of contigs1,115
Contig N509,076
Contig L50186
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)624

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,655,0866245,642,47218,0604910
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