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PmoICMP4331

Organism name:
Pseudomonas amygdali pv. mori (g-proteobacteria)
Infraspecific name:
Strain: ICMP 4331
BioSample:
SAMN03976273
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001400525.1 (latest)
RefSeq assembly accession:
GCF_001400525.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJQU01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
41.498292x
Sequencing technology:
Illumina MiSeq

IDs: 553171 [UID] 2498438 [GenBank] 2632418 [RefSeq]

See Genome Information for Pseudomonas amygdali

There are 95 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length5,818,342
Total ungapped length5,789,434
Gaps between scaffolds0
Number of scaffolds619
Scaffold N5020,579
Scaffold L5086
Number of contigs1,395
Contig N507,787
Contig L50210
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)619

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,818,3426195,789,43420,5797760
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