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PlpICMP3947

Organism name:
Pseudomonas syringae pv. lapsa (g-proteobacteria)
Infraspecific name:
Strain: ICMP3947
BioSample:
SAMN03976249
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001400495.1 (latest)
RefSeq assembly accession:
GCF_001400495.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJQQ01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
42.18949383x
Sequencing technology:
Illumina MiSeq

IDs: 553151 [UID] 2498398 [GenBank] 2631818 [RefSeq]

See Genome Information for Pseudomonas syringae

There are 431 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length5,850,429
Total ungapped length5,848,463
Gaps between scaffolds0
Number of scaffolds118
Scaffold N50124,931
Scaffold L5015
Number of contigs167
Contig N5082,491
Contig L5019
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)118

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,850,4291185,848,463124,931490
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