Format

Download Assembly

Send to:

Choose Destination

PcbICMP2823

Organism name:
Pseudomonas cannabina (g-proteobacteria)
Infraspecific name:
Strain: ICMP2823
BioSample:
SAMN03976291
BioProject:
PRJNA292453
Submitter:
University of Toronto
Date:
2015/10/20
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001400175.1 (latest)
RefSeq assembly accession:
GCF_001400175.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LJPX01
Assembly method:
CLC assembly cell v. 4.2
Genome coverage:
62.72137767x
Sequencing technology:
Illumina MiSeq

IDs: 552971 [UID] 2498058 [GenBank] 2500248 [RefSeq]

See Genome Information for Pseudomonas cannabina

There are 7 assemblies for this organism

See more

History (Show revision history)

Global statistics

Total sequence length5,916,539
Total ungapped length5,915,602
Gaps between scaffolds0
Number of scaffolds702
Scaffold N5026,272
Scaffold L5069
Number of contigs733
Contig N5026,269
Contig L5070
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)702

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,916,5397025,915,60226,272310
Support Center