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Sazu_1.0

Organism name:
Streptomyces azureus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: ATCC 14921
BioSample:
SAMD00031377
BioProject:
PRJDB3912
Submitter:
Microbial Genetics Division, Institute of Genetic Resources, Faculty of Agriculture, Kyushu University
Date:
2015/08/06
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001270025.1 (latest)
RefSeq assembly accession:
GCF_001270025.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BBYS01
Assembly method:
Microbial Genome Annotation Pipeline v. 2.19
Genome coverage:
62x
Sequencing technology:
Miseq

IDs: 474051 [UID] 2242628 [GenBank] 2816448 [RefSeq]

See Genome Information for Streptomyces azureus

History (Show revision history)

Comment

Global statistics

Total sequence length8,790,205
Total ungapped length8,789,954
Gaps between scaffolds0
Number of scaffolds350
Scaffold N5054,489
Scaffold L5048
Number of contigs364
Contig N5052,084
Contig L5050
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)364

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,790,2053508,789,95454,489140

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces azureusStreptomyces azureus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002148965.1Streptomyces swartbergensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type95.3976.6473.19

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected
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