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E11_London_26_VIM_2_06_13

Organism name:
Pseudomonas aeruginosa (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: E11_London_26_VIM_2_06_13
BioSample:
SAMEA3374655
BioProject:
PRJEB9312
Submitter:
PHE
Date:
2015/07/07
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_001181725.1 (latest)
RefSeq assembly accession:
GCF_001181725.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CVVM01
Genome coverage:
19x

IDs: 428101 [UID] 1998778 [GenBank] 2200738 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

There are 19270 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length7,093,957
Total ungapped length7,093,957
Number of contigs202
Contig N50102,656
Contig L5019
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)202

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,093,9572027,093,957102,65600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Pseudomonas aeruginosaPseudomonas aeruginosa

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_022496575.1Pseudomonas aeruginosatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022496575.1Pseudomonas aeruginosatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.4184.3596.37
Best-match type99.4184.3596.37

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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