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AptMant0

Organism name:
Apteryx mantelli mantelli (North Island brown kiwi)
BioSample:
SAMEA2560515
BioProject:
PRJEB6383
Submitter:
MPI-EVA
Date:
2015/06/21
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_001039765.1 (replaced)
RefSeq assembly accession:
GCF_001039765.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: 302107 unplaced scaffolds (in primary assembly-unit)
  • Unplaced scaffolds shorter than 1,000 bases were omitted from the RefSeq assembly. 23 unplaced scaffolds matching foreign sequences were also omitted from the RefSeq assembly.
  • Data displayed for RefSeq version
Genome coverage:
37x

IDs: 479431 [UID] 1836118 [GenBank] 2307598 [RefSeq]

See Genome Information for Apteryx mantelli

History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI
Annotation Status::Full annotation
Annotation Version::Apteryx australis mantelli Annotation Release 100
Annotation Pipeline::NCBI eukaryotic genome annotation pipeline
Annotation Software Version::6.4
Annotation Method::Best-placed RefSeq; Gnomon
Features Annotated::Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##

Global statistics

Total sequence length1,523,972,539
Total ungapped length1,311,194,650
Number of contigs209,195
Contig N5017,252
Contig L5021,821
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)24,720

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,523,972,539209,1951,311,194,65017,252184,4750
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