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Pcoq_1.0

Organism name:
Propithecus coquereli (Coquerel's sifaka)
Isolate:
6110/MARCELLA
Sex:
female
BioSample:
SAMN03121823
BioProject:
PRJNA251429
Submitter:
Baylor College of Medicine
Date:
2015/03/23
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000956105.1 (latest)
RefSeq assembly accession:
GCF_000956105.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
JZKE01
Assembly method:
AllPathsLG v. R43839; Atlas Link v. 1.0; Atlas Gapfill v. 2.2
Expected final version:
yes
Genome coverage:
104.7x
Sequencing technology:
Illumina

IDs: 315741 [UID] 1701038 [GenBank] 1729998 [RefSeq]

See Genome Information for Propithecus coquereli

History (Show revision history)

Comment

Global statistics

Total sequence length2,798,152,141
Total ungapped length2,083,764,538
Gaps between scaffolds0
Number of scaffolds22,539
Scaffold N505,604,909
Scaffold L50149
Number of contigs299,070
Contig N5028,129
Contig L5018,523
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)299,070

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,798,135,03722,5382,083,747,4345,604,909276,5310
MoleculeTotal
Length
Mitochondrion MT17,104
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