U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

Mnem_1.0

Organism name:
Macaca nemestrina (pig-tailed macaque)
Isolate:
M95218
Sex:
female
BioSample:
SAMN03121842
BioProject:
PRJNA251427
Submitter:
Baylor College of Medicine
Date:
2015/03/19
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000956065.1 (latest)
RefSeq assembly accession:
GCF_000956065.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JZLF01
Assembly method:
AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2; PBJelly2 v. 14.9.9
Expected final version:
yes
Genome coverage:
113.1x
Sequencing technology:
Illumina; PacBio RS; PacBio RSII

IDs: 313501 [UID] 1690548 [GenBank] 1700628 [RefSeq]

See Genome Information for Macaca nemestrina

History (Show revision history)

Comment

Global statistics

Total sequence length2,948,703,511
Total ungapped length2,838,486,523
Gaps between scaffolds0
Number of scaffolds9,733
Scaffold N5015,219,753
Scaffold L5062
Number of contigs94,057
Contig N50106,897
Contig L507,388
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)94,057

Supplemental Content

Recent activity

Your browsing activity is temporarily unavailable.

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,948,703,5119,7332,838,486,52315,219,75384,3240
Support Center