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ASM93586v1

Organism name:
Mycoplasma hominis (mycoplasmas)
Taxonomy check:
OK
Infraspecific name:
Strain: PL5
BioSample:
SAMN03083654
BioProject:
PRJNA277319
Submitter:
Virginia Commonwealth University
Date:
2015/03/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000935865.1 (latest)
RefSeq assembly accession:
GCF_000935865.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JRXA01
Assembly method:
Newbler v. 2.8
Expected final version:
yes
Genome coverage:
200.0x
Sequencing technology:
454

IDs: 302101 [UID] 1651088 [GenBank] 1659118 [RefSeq]

See Genome Information for Mycoplasma hominis

There are 53 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length767,767
Total ungapped length767,767
Number of contigs16
Contig N5090,264
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)16

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced767,76716767,76790,26400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Mycoplasma hominisMycoplasma hominis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000085865.1Mycoplasma hominis ATCC 23114type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000085865.1Mycoplasma hoministype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.0881.2293.71
Best-match type98.0881.2293.71

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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