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ASM82807v1

Organism name:
Tolypothrix campylonemoides VB511288 (cyanobacteria)
Infraspecific name:
Strain: VB511288
BioSample:
SAMN03274356
BioProject:
PRJNA271449
Submitter:
Indian Institute Of Chemical biology
Date:
2015/01/26
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000828075.1 (replaced)
RefSeq assembly accession:
GCF_000828075.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JXCB01
Assembly method:
AllPaths v. Dec-2014
Expected final version:
yes
Reference guided assembly:
de-novo
Genome coverage:
103.0x
Sequencing technology:
Illumina HiSeq

IDs: 247641 [UID] 1503678 [GenBank] 1507128 [RefSeq]

See Genome Information for Tolypothrix campylonemoides

History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

As per submitter request, the following 74 redundant sequences were suppressed from this genome (JXCB01000022, JXCB01000024, JXCB01000025, JXCB01000027, JXCB01000028, ... JXCB01000029, JXCB01000030, JXCB01000031, JXCB01000032, JXCB01000033, JXCB01000035, JXCB01000039, JXCB01000040, JXCB01000042, JXCB01000043, JXCB01000044, JXCB01000045, JXCB01000047, JXCB01000048, JXCB01000049, JXCB01000050, JXCB01000051, JXCB01000053, JXCB01000054, JXCB01000056, JXCB01000057, JXCB01000059, JXCB01000060, JXCB01000061, JXCB01000062, JXCB01000064, JXCB01000065, JXCB01000067, JXCB01000068, JXCB01000069, JXCB01000070, JXCB01000071, JXCB01000073, JXCB01000075, JXCB01000076, JXCB01000077, JXCB01000078, JXCB01000080, JXCB01000081, JXCB01000082, JXCB01000083, JXCB01000084, JXCB01000085, JXCB01000086, JXCB01000087, JXCB01000088, JXCB01000089, JXCB01000092, JXCB01000093, JXCB01000098, JXCB01000103, JXCB01000105, JXCB01000106, JXCB01000109, JXCB01000110, JXCB01000113, JXCB01000116, JXCB01000117, JXCB01000118, JXCB01000122, JXCB01000123, JXCB01000124, JXCB01000127, JXCB01000129, JXCB01000130, JXCB01000131, JXCB01000133, JXCB01000134, JXCB01000135)  more

Global statistics

Total sequence length10,627,177
Total assembly gap length99,614
Gaps between scaffolds0
Number of scaffolds135
Scaffold N501,097,626
Scaffold L504
Number of contigs253
Contig N50137,778
Contig L5023
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)135

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PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced10,627,17713510,527,5631,097,6261180
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