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R_fas_A44a

Organism name:
Rhodococcus fascians A44A (high GC Gram+)
Infraspecific name:
Strain: A44a
BioSample:
SAMN02569993
BioProject:
PRJNA233522
Submitter:
Oregon State University
Date:
2014/09/30
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000760735.1 (latest)
RefSeq assembly accession:
GCF_000760735.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JMEX01
Assembly method:
Velvet v. 0.7.55
Genome coverage:
872.5x
Sequencing technology:
Illumina GAIIx; Illumina HiSeq

IDs: 214131 [UID] 1317448 [GenBank] 1445438 [RefSeq]

See Genome Information for Rhodococcus fascians

There are 29 assemblies for this organism

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History (Show revision history)

Comment

Source DNA available from Jeff Chang, Botany & Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, OR 97331

Global statistics

Total sequence length5,947,044
Total assembly gap length13,975
Gaps between scaffolds0
Number of scaffolds9
Scaffold N503,065,789
Scaffold L501
Number of contigs66
Contig N50175,115
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)9

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,947,04495,933,0693,065,789570
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