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Bison_UMD1.0

Organism name:
Bison bison bison (American bison)
Isolate:
TAMUID 2011002044
Sex:
male
BioSample:
SAMN02947321
BioProject:
PRJNA257088
Submitter:
University of Maryland
Date:
2014/10/08
Synonyms:
bisBis1
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000754665.1 (latest)
RefSeq assembly accession:
GCF_000754665.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: 321751 unplaced scaffolds (in primary assembly-unit)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Unplaced scaffolds shorter than 500 bases were omitted from the RefSeq assembly.
  • Data displayed for RefSeq version
WGS Project:
JPYT01
Assembly method:
MaSuRCA v. 2.1.0
Genome coverage:
60.0x
Sequencing technology:
454; Illumina HiSeq

IDs: 237421 [UID] 1351428 [GenBank] 1426508 [RefSeq]

See Genome Information for Bison bison

History (Show revision history)

Comment

Global statistics

Total sequence length2,828,031,685
Total ungapped length2,632,263,697
Gaps between scaffolds0
Number of scaffolds128,431
Scaffold N507,192,658
Scaffold L50116
Number of contigs470,415
Contig N5019,971
Contig L5037,835
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)470,415

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,828,015,366128,4302,632,247,3787,192,658341,9840
MoleculeTotal
Length
Mitochondrion MT16,319
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