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DMR_v1.0

Organism name:
Fukomys damarensis (Damara mole-rat)
Sex:
male
BioSample:
SAMN02339281
BioProject:
PRJNA190641
Submitter:
BGI
Date:
2014/09/04
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000743615.1 (latest)
RefSeq assembly accession:
GCF_000743615.1 (suppressed) see latest RefSeq assembly for this species
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AYUG01
Assembly method:
SOAPdenovo v. 1.06
Genome coverage:
140x
Sequencing technology:
Illumina Hiseq 2000

IDs: 207201 [UID] 1195548 [GenBank] 1411478 [RefSeq]

See Genome Information for Fukomys damarensis

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,333,892,479
Total ungapped length2,285,984,782
Gaps between scaffolds0
Number of scaffolds74,730
Scaffold N505,314,287
Scaffold L50127
Number of contigs162,545
Contig N5044,830
Contig L5015,189
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)162,545

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,333,892,47974,7302,285,984,7825,314,28787,8150
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