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Doro.v1.0

Organism name:
Streptomyces aureocirculatus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL ISP-5401
BioSample:
SAMN02645372
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/15
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000725745.1 (latest)
RefSeq assembly accession:
GCF_000725745.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOAR01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
169x
Sequencing technology:
Illumina

IDs: 196141 [UID] 1169728 [GenBank] 1174078 [RefSeq]

See Genome Information for Streptomyces aureocirculatus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length9,315,748
Total ungapped length9,315,738
Gaps between scaffolds0
Number of scaffolds205
Scaffold N50136,678
Scaffold L5017
Number of contigs206
Contig N50136,678
Contig L5017
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)206

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,315,7482059,315,738136,67810

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces aureocirculatusStreptomyces aureocirculatus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000720475.1Streptomyces aureocirculatustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000720475.1Streptomyces aureocirculatustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9799.8399.77
Best-match type99.9799.8399.77

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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