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Doro.v1.0

Organism name:
Streptomyces sp. NRRL S-623 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL S-623
BioSample:
SAMN02645523
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/15
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000725705.1 (latest)
RefSeq assembly accession:
GCF_000725705.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOJC01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
162x
Sequencing technology:
Illumina

IDs: 196111 [UID] 1169688 [GenBank] 1174038 [RefSeq]

See Genome Information for Streptomyces sp. NRRL S-623

Pathogen Detection Resources

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length7,717,870
Total ungapped length7,717,750
Gaps between scaffolds0
Number of scaffolds73
Scaffold N50347,263
Scaffold L509
Number of contigs75
Contig N50327,626
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)75

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced7,717,870737,717,750347,26320

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. NRRL S-623Streptomyces sp. NRRL S-623

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650075.1Streptomyces microflavustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type97.5190.7782.25

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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