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ASM72195v1

Organism name:
Streptomyces sp. NRRL S-481 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: NRRL S-481
BioSample:
SAMN02645428
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/03
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000721955.1 (latest)
RefSeq assembly accession:
GCF_000721955.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOCV01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
46x
Sequencing technology:
Illumina

IDs: 194101 [UID] 1161238 [GenBank] 1168318 [RefSeq]

See Genome Information for Streptomyces sp. NRRL S-481

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length8,360,088
Total ungapped length8,106,726
Gaps between scaffolds0
Number of scaffolds106
Scaffold N50169,644
Scaffold L5016
Number of contigs1,542
Contig N5010,065
Contig L50253
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,542

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,360,0881068,106,726169,6441,4360

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. NRRL S-481Streptomyces sp. NRRL S-481

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014651075.1Streptomyces djakartensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type93.6273.5777.71

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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