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ASM72194v1

Organism name:
Streptomyces sp. NRRL WC-3774 (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL WC-3774
BioSample:
SAMN02645406
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/03
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000721945.1 (latest)
RefSeq assembly accession:
GCF_000721945.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOBZ01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
49x
Sequencing technology:
Illumina

IDs: 194091 [UID] 1161228 [GenBank] 1168878 [RefSeq]

See Genome Information for Streptomyces sp. NRRL WC-3774

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length9,604,196
Total ungapped length9,556,256
Gaps between scaffolds0
Number of scaffolds814
Scaffold N5022,397
Scaffold L50131
Number of contigs1,021
Contig N5020,342
Contig L50150
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,021

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,604,1968149,556,25622,3972070

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. NRRL WC-3774Streptomyces sp. NRRL WC-3774

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001513955.1Streptomyces pseudovenezuelaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type99.9999.8199.21

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna
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