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ASM72153v1

Organism name:
Streptomyces hygroscopicus subsp. hygroscopicus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL B-1477
BioSample:
SAMN02645505
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000721535.1 (latest)
RefSeq assembly accession:
GCF_000721535.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOIK01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
212x
Sequencing technology:
Illumina

IDs: 193911 [UID] 1160638 [GenBank] 1167878 [RefSeq]

See Genome Information for Streptomyces hygroscopicus

There are 13 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length9,919,231
Total ungapped length9,919,231
Number of contigs369
Contig N50159,554
Contig L5018
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)369

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,919,2313699,919,231159,55400

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces hygroscopicus subsp. hygroscopicusStreptomyces hygroscopicus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001553455.1Streptomyces hygroscopicus subsp. hygroscopicustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001553455.1Streptomyces hygroscopicustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.8785.3189.41
Best-match type97.8785.3189.41

ANI result

Taxonomy check statusBest match statusComment
OKsubspecies-matchna
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