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ASM72123v1

Organism name:
Streptomyces olivaceus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL B-3009
BioSample:
SAMN02645259
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000721235.1 (latest)
RefSeq assembly accession:
GCF_000721235.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOFH01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
116x
Sequencing technology:
Illumina

IDs: 193751 [UID] 1160318 [GenBank] 1168818 [RefSeq]

See Genome Information for Streptomyces olivaceus

There are 41 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length8,584,392
Total ungapped length8,584,392
Number of contigs188
Contig N50199,385
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)188

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,584,3921888,584,392199,38500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces olivaceusStreptomyces olivaceus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_015645455.1Streptomyces olivaceustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_015645455.1Streptomyces olivaceustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.9486.5490.56
Best-match type97.9486.5490.56

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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