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ASM72068v1

Organism name:
Streptomyces rimosus subsp. rimosus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL WC-3877
BioSample:
SAMN02645418
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000720685.1 (latest)
RefSeq assembly accession:
GCF_000720685.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOCL01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
164x
Sequencing technology:
Illumina

IDs: 193481 [UID] 1159778 [GenBank] 1167138 [RefSeq]

See Genome Information for Streptomyces rimosus

There are 41 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length8,724,291
Total ungapped length8,724,291
Number of contigs119
Contig N50180,248
Contig L5013
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)119

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,724,2911198,724,291180,24800

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces rimosus subsp. rimosusStreptomyces rimosus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000717285.1Streptomyces rimosus subsp. rimosustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000717285.1Streptomyces rimosustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9999.8690.85
Best-match type99.9999.8690.85

ANI result

Taxonomy check statusBest match statusComment
OKsubspecies-matchna
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