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ASM71992v1

Organism name:
Streptomyces sp. NRRL F-2202 (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: NRRL F-2202
BioSample:
SAMN02645502
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000719925.1 (latest)
RefSeq assembly accession:
GCF_000719925.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOIH01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
268x
Sequencing technology:
Illumina

IDs: 193101 [UID] 1159018 [GenBank] 1356468 [RefSeq]

See Genome Information for Streptomyces sp. NRRL F-2202

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length7,806,945
Total ungapped length7,806,945
Number of contigs104
Contig N50230,623
Contig L5011
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)104

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,806,9451047,806,945230,62300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces sp. NRRL F-2202Streptomyces sp. NRRL F-2202

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000717645.1Streptomyces californicustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.7895.1695.42

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
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