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ASM71935v1

Organism name:
Streptomyces griseus subsp. griseus (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Culture-collection: NRRL:F-5144
Infraspecific name:
Strain: NRRL F-5144
BioSample:
SAMN02645278
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000719355.1 (latest)
RefSeq assembly accession:
GCF_000719355.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOGA01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
258x
Sequencing technology:
Illumina

IDs: 192811 [UID] 1158448 [GenBank] 1167358 [RefSeq]

See Genome Information for Streptomyces griseus

There are 71 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length7,849,817
Total ungapped length7,849,817
Number of contigs89
Contig N50278,130
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)89

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,849,817897,849,817278,13000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces griseus subsp. griseusStreptomyces griseus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_039544735.1Streptomyces griseussuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650395.1Streptomyces pluricolorescenssuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type91.5274.2068.09
Best-match type99.5285.8491.90

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchbest matching type is suspected of being inaccurate