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ASM71875v1

Organism name:
Streptomyces rimosus subsp. rimosus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL WC-3560
BioSample:
SAMN02645402
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000718755.1 (latest)
RefSeq assembly accession:
GCF_000718755.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOBV01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
187x
Sequencing technology:
Illumina

IDs: 192511 [UID] 1157838 [GenBank] 1168618 [RefSeq]

See Genome Information for Streptomyces rimosus

There are 40 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length8,603,240
Total ungapped length8,603,240
Number of contigs191
Contig N50112,113
Contig L5025
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)191

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced8,603,2401918,603,240112,11300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces rimosus subsp. rimosusStreptomyces rimosus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_008704655.1Streptomyces rimosustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_008704655.1Streptomyces rimosustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type96.3289.1781.95
Best-match type96.3289.1781.95

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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