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ASM71859v1

Organism name:
Streptomyces bikiniensis (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL ISP-5582
BioSample:
SAMN02645375
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000718595.1 (latest)
RefSeq assembly accession:
GCF_000718595.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOAU01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
240x
Sequencing technology:
Illumina

IDs: 192431 [UID] 1157678 [GenBank] 1165148 [RefSeq]

See Genome Information for Streptomyces bikiniensis

There are 4 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length7,389,938
Total ungapped length7,389,938
Number of contigs126
Contig N50232,053
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)126

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,389,9381267,389,938232,05300

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces bikiniensisStreptomyces bikiniensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000716245.1Streptomyces bikiniensissuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000716245.1Streptomyces bikiniensissuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9798.5999.25
Best-match type99.9798.5999.25

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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