U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



Try the new Datasets Genome page

ASM71845v1

Organism name:
Streptomyces globisporus subsp. globisporus (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: NRRL B-2709
BioSample:
SAMN02645339
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000718455.1 (latest)
RefSeq assembly accession:
GCF_000718455.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JNZK01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
267x
Sequencing technology:
Illumina

IDs: 192361 [UID] 1157558 [GenBank] 1166858 [RefSeq]

See Genome Information for Streptomyces globisporus

There are 9 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length7,454,528
Total ungapped length7,454,528
Number of contigs84
Contig N50235,137
Contig L5011
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)84

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced7,454,528847,454,528235,13700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces globisporus subsp. globisporusStreptomyces globisporus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650395.1Streptomyces pluricolorescenssuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type94.9674.9776.21

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna
Support Center