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ASM71829v1

Organism name:
Streptomyces capuensis (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: NRRL B-3501
BioSample:
SAMN02645264
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000718295.1 (latest)
RefSeq assembly accession:
GCF_000718295.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOFM01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
142x
Sequencing technology:
Illumina

IDs: 192291 [UID] 1157418 [GenBank] 1164988 [RefSeq]

See Genome Information for Streptomyces capuensis

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length9,439,884
Total ungapped length9,439,884
Number of contigs318
Contig N50140,407
Contig L5022
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)318

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,439,8843189,439,884140,40700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces capuensisStreptomyces capuensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_022760195.1Streptomyces rimosustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type100.0098.7196.45

ANI result

Taxonomy check statusBest match statusComment
Inconclusivemismatchdeclared species has no type-assembly
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