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ASM71651v1

Organism name:
Streptomyces rimosus subsp. rimosus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL B-16073
BioSample:
SAMN02645202
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/01
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000716515.1 (latest)
RefSeq assembly accession:
GCF_000716515.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JNWX01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
19x
Sequencing technology:
Illumina

IDs: 191411 [UID] 1155618 [GenBank] 1360638 [RefSeq]

See Genome Information for Streptomyces rimosus

Pathogen Detection Resources

There are 41 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length9,386,539
Total ungapped length9,386,539
Number of contigs140
Contig N50199,375
Contig L5016
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)140

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced9,386,5391409,386,539199,37500

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces rimosus subsp. rimosusStreptomyces rimosus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_008704655.1Streptomyces rimosustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_008704655.1Streptomyces rimosustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.6891.4991.74
Best-match type98.6891.4991.74

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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