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ASM71621v1

Organism name:
Streptomyces resistomycificus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: NRRL ISP-5133
BioSample:
SAMN02645381
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/01
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000716215.1 (latest)
RefSeq assembly accession:
GCF_000716215.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JOBA01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
90x
Sequencing technology:
Illumina

IDs: 191341 [UID] 1155448 [GenBank] 1161408 [RefSeq]

See Genome Information for Streptomyces resistomycificus

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length9,462,133
Total ungapped length9,098,934
Gaps between scaffolds0
Number of scaffolds141
Scaffold N50141,587
Scaffold L5020
Number of contigs1,798
Contig N509,053
Contig L50305
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,798

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced9,462,1331419,098,934141,5871,6570

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces resistomycificusStreptomyces resistomycificus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001514265.1Streptomyces resistomycificustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001514265.1Streptomyces resistomycificustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.8799.4798.73
Best-match type99.8799.4798.73

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna
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