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rev-51

Organism name:: Streptomyces rimosus (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: R6-500MV9-R8
BioSample:: SAMN02730068
BioProject:: PRJNA242833
Submitter:: TU Kaiserslautern
Date:: 2014/06/13
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000707965.1 (latest)
RefSeq assembly accession:: GCF_000707965.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JMGY01
Assembly method:: Velvet v. 1.2.09
Expected final version:: no
Genome coverage:: 181.0x
Sequencing technology:: Illumina MiSeq

IDs: 187141 [UID] 1131618 [GenBank] 1576038 [RefSeq]

See Genome Information for Streptomyces rimosus

Pathogen Detection Resources

There are 41 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000707965.1	=	GCF_000707965.1	rev-51	Scaffold	Latest GenBank, Latest RefSeq

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Date::06/04/2014 11:33:25
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Provider::NCBI
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Annotation Software revision::2.5 (rev. 436558)
Genes::6,618
CDS::6,274
Pseudo Genes::253
rRNAs::12 ( 5S, 16S, 23S )
tRNAs::66
ncRNA::13
Frameshifted Genes::227
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	8,386,169
Total ungapped length	8,385,015
Gaps between scaffolds	0
Number of scaffolds	375
Scaffold N50	419,227
Scaffold L50	8
Number of contigs	472
Contig N50	94,478
Contig L50	28
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	375

	ANI	Query coverage	Subject coverage
Declared type	99.93	99.68	87.17
Best-match type	99.93	99.68	87.17

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rev-51

See Genome Information for Streptomyces rimosus

Pathogen Detection Resources

There are 41 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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