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Hhal_2.0

Organism name:
Halyomorpha halys (brown marmorated stink bug)
Isolate:
HHAL.00
Sex:
female
BioSample:
SAMN02737379
BioProject:
PRJNA168118
Submitter:
The i5k Initiative
Date:
2017/12/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000696795.2 (replaced)
RefSeq assembly accession:
GCF_000696795.2 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JMPT02
Assembly method:
AllPaths LG v. 44620; Atlas Link v. 1.0; Atlas GapFill v. 2.2; redundans v. 0.12c
Expected final version:
no
Genome coverage:
113.7x
Sequencing technology:
Illumina

IDs: 1492571 [UID] 5797198 [GenBank] 6212378 [RefSeq]

See Genome Information for Halyomorpha halys

History (Show revision history)

Comment

Global statistics

Total sequence length998,240,896
Total ungapped length996,505,068
Gaps between scaffolds0
Number of scaffolds16,639
Scaffold N50393,089
Scaffold L50724
Number of contigs20,771
Contig N50254,075
Contig L501,078
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)20,771

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced998,224,37816,638996,488,550393,0894,1320
MoleculeTotal
Length
Mitochondrion MT16,518