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ASM69194v2

Organism name:
Babesia microti strain RI (apicomplexans)
Infraspecific name:
Strain: RI
BioSample:
SAMEA3139016
BioProject:
PRJEA72411
Submitter:
Centre National de Sequencage GENOSCOPE
Date:
2015/07/30
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000691945.2 (latest)
RefSeq assembly accession:
GCF_000691945.2 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in GenBank: chromosome MT (3 variants) (in non-nuclear assembly-unit)
  • The RefSeq assembly retains only one of the four variant mitochondrial genomes present in the GenBank assembly.
  • Data displayed for RefSeq version

IDs: 1108121 [UID] 4489708 [GenBank] 4596718 [RefSeq]

See Genome Information for Babesia microti

There are 7 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length6,434,485
Total ungapped length6,434,385
Gaps between scaffolds0
Number of scaffolds6
Scaffold N501,766,409
Scaffold L502
Number of contigs7
Contig N501,766,409
Contig L502
Total number of chromosomes and plasmids6
Number of component sequences (WGS or clone)6

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_000691955.2)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome IFO082871.1=NC_027205.1
Chromosome IIFO082872.1=NC_027206.1
Chromosome IIILN871598.1=NC_027207.2
Chromosome IVLN871599.1=NC_034969.1

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All6,395,28146,395,1811,766,40910
Chromosome I1,304,28111,304,2811,304,28100
Chromosome II1,508,38511,508,2851,508,38510
Chromosome III1,766,40911,766,4091,766,40900
Chromosome IV1,816,20611,816,2061,816,20600
MoleculeTotal
Length
All39,204
Mitochondrion MT10,547
Apicoplast Pltd28,657
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